Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_1522 | Not Available | Negative | 1703004 - 1703468 | 16902.9 |
| hypothetical protein | EDC56_1523 | Not Available | Positive | 1703736 - 1704260 | 19717.9 |
| hypothetical protein | EDC56_1524 | Not Available | Positive | 1704241 - 1704558 | 12154.4 |
| uncharacterized protein duf2846 | EDC56_1525 | Not Available | Negative | 1704750 - 1705223 | 16701.2 |
| hypothetical protein | EDC56_1526 | Not Available | Negative | 1705979 - 1706845 | 33552.9 |
| Trna-pro | Not Available | Not Available | Positive | 1707913 - 1707989 | Not Available |
| integration host factor subunit alpha | EDC56_1529 | Not Available | Negative | 1708285 - 1708593 | 11555.7 |
| phenylalanyl-trna synthetase beta subunit | EDC56_1530 | Not Available | Negative | 1708599 - 1710977 | 86174.4 |
| phenylalanyl-trna synthetase alpha subunit | EDC56_1531 | Not Available | Negative | 1711064 - 1712083 | 37660.0 |
| lsu ribosomal protein l20p | EDC56_1532 | Not Available | Negative | 1712311 - 1712664 | 13254.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
