Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_1490 | Not Available | Negative | 1675162 - 1675602 | 16184.5 |
| fimbrial protein | EDC56_1491 | Not Available | Negative | 1675780 - 1676334 | 19627.2 |
| hypothetical protein | EDC56_1492 | Not Available | Negative | 1676360 - 1676521 | 5996.84 |
| type 1 fimbria pilin | EDC56_1493 | Not Available | Negative | 1676608 - 1677138 | 18954.5 |
| type 1 fimbria pilin | EDC56_1494 | Not Available | Negative | 1677148 - 1678197 | 37233.2 |
| outer membrane usher protein | EDC56_1495 | Not Available | Negative | 1678188 - 1680716 | 91268.6 |
| p pilus assembly chaperone papd | EDC56_1496 | Not Available | Negative | 1680719 - 1681444 | 25845.1 |
| type 1 fimbria pilin | EDC56_1497 | Not Available | Negative | 1681534 - 1682055 | 18825.8 |
| ribosomal-protein-alanine n-acetyltransferase | EDC56_1498 | Not Available | Negative | 1683010 - 1683540 | 20024.2 |
| ribosomal-protein-serine acetyltransferase | EDC56_1499 | Not Available | Negative | 1683720 - 1684256 | 20306.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
