Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_1480 | Not Available | Negative | 1665074 - 1666690 | 62108.7 |
| hypothetical protein | EDC56_1481 | Not Available | Negative | 1666965 - 1667216 | 9299.64 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | EDC56_1482 | Not Available | Positive | 1667524 - 1669035 | 54922.7 |
| hypothetical protein | EDC56_1483 | Not Available | Positive | 1669289 - 1669567 | 10652.8 |
| hypothetical protein | EDC56_1484 | Not Available | Negative | 1670221 - 1670685 | 18080.9 |
| gluconate kinase | EDC56_1485 | Not Available | Negative | 1670990 - 1671520 | 20237.2 |
| hypothetical protein | EDC56_1486 | Not Available | Negative | 1671933 - 1672580 | 24757.6 |
| uncharacterized protein (duf924 family) | EDC56_1487 | Not Available | Negative | 1672863 - 1673399 | 20385.0 |
| endoribonuclease l-psp | EDC56_1488 | Not Available | Negative | 1673587 - 1673937 | 12977.6 |
| hypothetical protein | EDC56_1489 | Not Available | Negative | 1674130 - 1674684 | 19932.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
