Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor ts | EDC56_1470 | Not Available | Negative | 1652148 - 1653014 | 30425.4 |
| small subunit ribosomal protein s2 | EDC56_1471 | Not Available | Negative | 1653150 - 1653902 | 27589.2 |
| methionyl aminopeptidase | EDC56_1472 | Not Available | Positive | 1654348 - 1655169 | 30238.6 |
| utp--glnb (protein pii) uridylyltransferase glnd | EDC56_1473 | Not Available | Positive | 1655253 - 1657916 | 102440.0 |
| succinyldiaminopimelate aminotransferase | EDC56_1474 | Not Available | Positive | 1657976 - 1659184 | 44712.2 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | EDC56_1475 | Not Available | Positive | 1659181 - 1659864 | 25410.1 |
| arsenate reductase | EDC56_1476 | Not Available | Positive | 1659937 - 1660287 | 13360.8 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | EDC56_1477 | Not Available | Positive | 1660365 - 1661405 | 36474.7 |
| hypothetical protein | EDC56_1478 | Not Available | Positive | 1661686 - 1662573 | 32504.9 |
| signal transduction histidine kinase | EDC56_1479 | Not Available | Positive | 1662728 - 1664953 | 83328.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
