Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | EDC56_1459 | Not Available | Negative | 1640953 - 1641723 | 27457.8 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | EDC56_1460 | Not Available | Negative | 1641723 - 1642163 | 16358.0 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | EDC56_1461 | Not Available | Negative | 1642226 - 1643263 | 35416.7 |
| outer membrane protein | EDC56_1462 | Not Available | Negative | 1643267 - 1643794 | 19312.8 |
| outer membrane protein insertion porin family | EDC56_1463 | Not Available | Negative | 1643832 - 1646396 | 94348.6 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | EDC56_1465 | Not Available | Negative | 1647797 - 1648975 | 41549.3 |
| phosphatidate cytidylyltransferase | EDC56_1466 | Not Available | Negative | 1648986 - 1649825 | 29607.2 |
| undecaprenyl diphosphate synthase | EDC56_1467 | Not Available | Negative | 1649818 - 1650591 | 28479.8 |
| ribosome recycling factor | EDC56_1468 | Not Available | Negative | 1650678 - 1651235 | 20886.2 |
| uridylate kinase | EDC56_1469 | Not Available | Negative | 1651337 - 1652077 | 26351.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
