Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | EDC56_1449 | Not Available | Negative | 1628034 - 1628756 | 26558.6 |
| cell division protein ftsb | EDC56_1450 | Not Available | Negative | 1628756 - 1629043 | 11114.7 |
| enolase | EDC56_1451 | Not Available | Negative | 1629155 - 1630444 | 45447.5 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | EDC56_1452 | Not Available | Negative | 1630508 - 1631365 | 31139.8 |
| ctp synthase | EDC56_1453 | Not Available | Negative | 1631401 - 1633026 | 59463.0 |
| trna(ile)-lysidine synthase | EDC56_1454 | Not Available | Negative | 1633159 - 1634490 | 49240.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | EDC56_1455 | Not Available | Negative | 1634494 - 1635444 | 35095.1 |
| dna polymerase-3 subunit alpha | EDC56_1456 | Not Available | Negative | 1635667 - 1639155 | 130758.0 |
| rnase hii | EDC56_1457 | Not Available | Negative | 1639171 - 1639776 | 22105.4 |
| lipid-a-disaccharide synthase | EDC56_1458 | Not Available | Negative | 1639778 - 1640953 | 43298.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
