Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide-nucleotide amidase | EDC56_1439 | Not Available | Positive | 1617371 - 1618633 | 45340.1 |
| uncharacterized protein duf4442 | EDC56_1440 | Not Available | Negative | 1618662 - 1619258 | 22074.3 |
| dna mismatch repair protein muts | EDC56_1441 | Not Available | Positive | 1619503 - 1622115 | 96469.1 |
| ferredoxin | EDC56_1442 | Not Available | Positive | 1622238 - 1622561 | 12045.1 |
| rna polymerase rpos-like sigma 38 subunit | EDC56_1443 | Not Available | Negative | 1622679 - 1623767 | 40928.5 |
| lipoprotein nlpd | EDC56_1444 | Not Available | Negative | 1623939 - 1624706 | 27882.1 |
| putative membrane protein | EDC56_1445 | Not Available | Negative | 1624858 - 1625796 | 33584.3 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | EDC56_1446 | Not Available | Negative | 1625821 - 1626474 | 23873.8 |
| trna pseudouridine13 synthase | EDC56_1447 | Not Available | Negative | 1626511 - 1627551 | 39113.6 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | EDC56_1448 | Not Available | Negative | 1627551 - 1628033 | 17195.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
