Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional merr regulator | EDC56_1429 | Not Available | Negative | 1604332 - 1604757 | 16252.3 |
| co/zn/cd efflux system component | EDC56_1430 | Not Available | Positive | 1604871 - 1605506 | 22853.9 |
| acetyltransferase (gnat) family protein | EDC56_1431 | Not Available | Negative | 1605548 - 1606138 | 22319.7 |
| outer membrane receptor protein involved in fe transport | EDC56_1432 | Not Available | Negative | 1606272 - 1608578 | 83453.0 |
| hypothetical protein | EDC56_1433 | Not Available | Positive | 1608583 - 1608873 | 10782.4 |
| aaa domain-containing protein | EDC56_1434 | Not Available | Negative | 1608978 - 1612628 | 137176.0 |
| uncharacterized protein duf4194 | EDC56_1435 | Not Available | Negative | 1612628 - 1613485 | 32092.8 |
| hypothetical protein | EDC56_1436 | Not Available | Negative | 1613489 - 1614952 | 55905.8 |
| cytochrome p450 | EDC56_1437 | Not Available | Negative | 1615137 - 1616495 | 51976.9 |
| tetr family transcriptional regulator | EDC56_1438 | Not Available | Positive | 1616725 - 1617309 | 21774.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
