Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voltage-gated potassium channel | EDC56_1409 | Not Available | Positive | 1587159 - 1587992 | 31309.8 |
| trna 2-thiouridine synthesizing protein a | EDC56_1410 | Not Available | Negative | 1588067 - 1588303 | 8767.57 |
| hypothetical protein | EDC56_1411 | Not Available | Negative | 1588293 - 1588538 | 8950.39 |
| s-formylglutathione hydrolase | EDC56_1412 | Not Available | Negative | 1588678 - 1589547 | 31772.8 |
| glycine cleavage system regulatory protein | EDC56_1413 | Not Available | Positive | 1589779 - 1590300 | 18623.1 |
| hypothetical protein | EDC56_1414 | Not Available | Negative | 1590396 - 1590755 | 13602.0 |
| hypothetical protein | EDC56_1415 | Not Available | Negative | 1590797 - 1591225 | 16376.3 |
| chorismate synthase | EDC56_1416 | Not Available | Negative | 1591400 - 1592497 | 39258.9 |
| ribosomal protein l3 glutamine methyltransferase | EDC56_1417 | Not Available | Negative | 1592624 - 1593589 | 35896.6 |
| gtp cyclohydrolase i | EDC56_1418 | Not Available | Positive | 1593805 - 1594347 | 19992.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
