Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin reductase (nadph) | EDC56_0066 | Not Available | Positive | 72688 - 73638 | 33761.8 |
| leucyl/phenylalanyl-trna--protein transferase | EDC56_0067 | Not Available | Positive | 73699 - 74415 | 26968.9 |
| arginine-trna-protein transferase | EDC56_0068 | Not Available | Positive | 74433 - 75143 | 27306.2 |
| translation initiation factor 1 (bif-1) | EDC56_0069 | Not Available | Positive | 75261 - 75479 | 8306.05 |
| Ncrna_class:other | Not Available | Not Available | Positive | 76072 - 76248 | Not Available |
| atp-dependent clp protease atp-binding subunit clpa | EDC56_0070 | Not Available | Negative | 75551 - 77824 | 83118.0 |
| atp-dependent clp protease adaptor protein clps | EDC56_0071 | Not Available | Negative | 77857 - 78222 | 13521.2 |
| cspa family cold shock protein | EDC56_0072 | Not Available | Positive | 78461 - 78712 | 8942.54 |
| isocitrate dehydrogenase (nadp) | EDC56_0073 | Not Available | Negative | 78767 - 80020 | 45974.2 |
| 23s rrna pseudouridine2457 synthase | EDC56_0074 | Not Available | Positive | 80137 - 80784 | 24510.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
