Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette subfamily c protein lapb | EDC56_1379 | Not Available | Positive | 1555473 - 1557638 | 78791.4 |
| adhesin transport system membrane fusion protein | EDC56_1380 | Not Available | Positive | 1557631 - 1558965 | 48979.3 |
| adhesin transport system outer membrane protein | EDC56_1381 | Not Available | Positive | 1558962 - 1560320 | 50741.7 |
| ompa family protein | EDC56_1382 | Not Available | Positive | 1560310 - 1561059 | 27585.9 |
| glycine betaine/choline abc-type transport system substrate-binding protein | EDC56_1383 | Not Available | Positive | 1561059 - 1561985 | 35802.4 |
| hypothetical protein | EDC56_1384 | Not Available | Positive | 1562088 - 1562894 | 29838.9 |
| oop family ompa-ompf porin | EDC56_1385 | Not Available | Negative | 1562983 - 1563996 | 35912.0 |
| oop family ompa-ompf porin | EDC56_1386 | Not Available | Negative | 1564418 - 1565467 | 37056.7 |
| nuclease-like protein | EDC56_1387 | Not Available | Negative | 1565946 - 1568117 | 82059.7 |
| membrane-bound lytic murein transglycosylase b | EDC56_1388 | Not Available | Negative | 1568322 - 1569536 | 44580.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
