Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna synthetase | EDC56_1357 | Not Available | Positive | 1525763 - 1527805 | 76282.8 |
| electron transport complex protein rnfa | EDC56_1358 | Not Available | Positive | 1527986 - 1528564 | 20480.0 |
| electron transport complex protein rnfb | EDC56_1359 | Not Available | Positive | 1528592 - 1529206 | 21631.0 |
| electron transport complex protein rnfc | EDC56_1360 | Not Available | Positive | 1529203 - 1531857 | 93000.6 |
| electron transport complex protein rnfd | EDC56_1361 | Not Available | Positive | 1531873 - 1532907 | 37266.2 |
| electron transport complex protein rnfg | EDC56_1362 | Not Available | Positive | 1532923 - 1533561 | 23114.2 |
| electron transport complex protein rnfe | EDC56_1363 | Not Available | Positive | 1533561 - 1534271 | 25037.4 |
| twitching motility protein pilu | EDC56_1364 | Not Available | Negative | 1534336 - 1535487 | 42371.0 |
| lipopolysaccharide kinase (kdo/waap) family protein | EDC56_1365 | Not Available | Negative | 1535631 - 1536374 | 29074.5 |
| enoyl-coa hydratase/carnithine racemase | EDC56_1366 | Not Available | Negative | 1536448 - 1537227 | 28160.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
