Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-barrel assembly machine subunit bamd | EDC56_1347 | Not Available | Negative | 1514806 - 1515675 | 32903.1 |
| 23s rrna pseudouridine1911/1915/1917 synthase | EDC56_1348 | Not Available | Positive | 1515795 - 1516763 | 35979.4 |
| hypothetical protein | EDC56_1349 | Not Available | Positive | 1516764 - 1517543 | 28261.7 |
| atp-dependent clp protease atp-binding subunit clpb | EDC56_1350 | Not Available | Positive | 1517688 - 1520324 | 97587.4 |
| uncharacterized protein duf4124 | EDC56_1351 | Not Available | Negative | 1520393 - 1520836 | 16103.4 |
| acetolactate synthase large subunit | EDC56_1352 | Not Available | Positive | 1521342 - 1523117 | 65464.7 |
| acetolactate synthase small subunit | EDC56_1353 | Not Available | Positive | 1523117 - 1523608 | 17766.6 |
| dctp deaminase | EDC56_1354 | Not Available | Negative | 1523720 - 1524289 | 21303.1 |
| atp-binding protein involved in chromosome partitioning | EDC56_1355 | Not Available | Negative | 1524378 - 1525475 | 38585.8 |
| hypothetical protein | EDC56_1356 | Not Available | Negative | 1525587 - 1525688 | 3759.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
