Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 1505969 - 1506045 | Not Available |
| putative f420-dependent oxidoreductase | EDC56_1338 | Not Available | Negative | 1506169 - 1507284 | 41435.0 |
| spr peptidase | EDC56_1339 | Not Available | Positive | 1507398 - 1507970 | 21330.7 |
| hypothetical protein | EDC56_1340 | Not Available | Negative | 1507875 - 1508099 | 7999.95 |
| livcs family branched-chain amino acid:cation transporter | EDC56_1341 | Not Available | Positive | 1508115 - 1509434 | 46710.5 |
| hypothetical protein | EDC56_1342 | Not Available | Positive | 1509578 - 1510141 | 21207.2 |
| uracil phosphoribosyltransferase | EDC56_1343 | Not Available | Negative | 1510211 - 1510837 | 23103.2 |
| thioredoxin reductase (nadph) | EDC56_1344 | Not Available | Negative | 1510992 - 1512059 | 39004.2 |
| dna-binding transcriptional lysr family regulator | EDC56_1345 | Not Available | Positive | 1512229 - 1513107 | 32455.5 |
| dna recombination protein rmuc | EDC56_1346 | Not Available | Negative | 1513097 - 1514626 | 58411.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
