Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna reductase | EDC56_1327 | Not Available | Negative | 1497018 - 1498301 | 46619.7 |
| tetratricopeptide repeat protein | EDC56_1328 | Not Available | Positive | 1498625 - 1500349 | 63889.8 |
| outer membrane lipoprotein lolb | EDC56_1329 | Not Available | Positive | 1500447 - 1501091 | 23865.7 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | EDC56_1330 | Not Available | Positive | 1501088 - 1501981 | 32337.4 |
| Trna-gln | Not Available | Not Available | Positive | 1502030 - 1502104 | Not Available |
| ribose-phosphate pyrophosphokinase | EDC56_1332 | Not Available | Positive | 1502198 - 1503139 | 34085.3 |
| large subunit ribosomal protein l25 | EDC56_1333 | Not Available | Positive | 1503251 - 1503889 | 22476.7 |
| pth1 family peptidyl-trna hydrolase | EDC56_1334 | Not Available | Positive | 1504054 - 1504635 | 21004.5 |
| hypothetical protein | EDC56_1335 | Not Available | Positive | 1504717 - 1505811 | 39547.4 |
| hypothetical protein | EDC56_1336 | Not Available | Negative | 1505749 - 1505871 | 4698.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
