Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein a | EDC56_1318 | Not Available | Negative | 1486080 - 1487855 | 64561.0 |
| 5'-methylthioadenosine nucleosidase | EDC56_1319 | Not Available | Negative | 1487943 - 1488668 | 25912.2 |
| atp-dependent rna helicase rhlb | EDC56_1320 | Not Available | Negative | 1488740 - 1490131 | 51569.2 |
| putative membrane protein ypha (doxx/surf4 family) | EDC56_1321 | Not Available | Positive | 1490494 - 1491168 | 24721.5 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1491853 - 1491968 | Not Available |
| glutamate synthase domain-containing protein 2 | EDC56_1322 | Not Available | Negative | 1491232 - 1492710 | 53834.3 |
| mate family multidrug resistance protein | EDC56_1323 | Not Available | Positive | 1492891 - 1494255 | 48581.2 |
| adenylyltransferase/sulfurtransferase | EDC56_1324 | Not Available | Negative | 1494274 - 1495041 | 27841.5 |
| [protein release factor]-glutamine n5-methyltransferase | EDC56_1325 | Not Available | Negative | 1495055 - 1495933 | 32557.5 |
| peptide chain release factor 1 (brf-1) | EDC56_1326 | Not Available | Negative | 1495933 - 1497021 | 40328.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
