Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | EDC56_1308 | Not Available | Positive | 1477112 - 1477780 | 25674.8 |
| putative membrane protein ygl010w | EDC56_1309 | Not Available | Negative | 1477810 - 1478268 | 17333.7 |
| iron complex outermembrane receptor protein | EDC56_1310 | Not Available | Positive | 1478656 - 1481250 | 93956.6 |
| citrate lyase subunit beta/citryl-coa lyase | EDC56_1311 | Not Available | Negative | 1481359 - 1482228 | 31181.3 |
| 8-oxo-dgtp pyrophosphatase mutt (nudix family) | EDC56_1312 | Not Available | Negative | 1482340 - 1482996 | 24428.1 |
| acyl dehydratase | EDC56_1313 | Not Available | Negative | 1483074 - 1483535 | 16807.3 |
| hypothetical protein | EDC56_1314 | Not Available | Positive | 1483796 - 1484002 | 7600.23 |
| acylphosphatase | EDC56_1315 | Not Available | Positive | 1484062 - 1484340 | 10432.5 |
| trna1val (adenine37-n6)-methyltransferase | EDC56_1316 | Not Available | Positive | 1484455 - 1485174 | 26628.9 |
| type ii secretion system (t2ss) protein b | EDC56_1317 | Not Available | Negative | 1485175 - 1486080 | 32622.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
