Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf4279 | EDC56_0057 | Not Available | Negative | 60625 - 61035 | 15333.2 |
| carboxyl-terminal processing protease | EDC56_0058 | Not Available | Positive | 61311 - 63428 | 79481.1 |
| nadph-glutathione reductase | EDC56_0059 | Not Available | Negative | 63478 - 64845 | 48510.6 |
| uroporphyrin-iii c-methyltransferase/precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase | EDC56_0060 | Not Available | Negative | 64881 - 66266 | 50084.9 |
| seryl-trna synthetase | EDC56_0061 | Not Available | Negative | 66377 - 67660 | 47429.3 |
| crcb protein | EDC56_0062 | Not Available | Negative | 67677 - 68069 | 14135.7 |
| putative atpase | EDC56_0063 | Not Available | Negative | 68073 - 69419 | 49545.3 |
| outer membrane lipoprotein carrier protein | EDC56_0064 | Not Available | Negative | 69422 - 70051 | 22541.8 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 70539 - 70896 | Not Available |
| dna translocase ftsk | EDC56_0065 | Not Available | Negative | 70122 - 72455 | 84225.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
