Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_1243 | Not Available | Positive | 1427215 - 1428216 | 37478.9 |
| uncharacterized protein (tigr00369 family) | EDC56_1244 | Not Available | Positive | 1428251 - 1428685 | 15632.7 |
| hypothetical protein | EDC56_1245 | Not Available | Negative | 1429009 - 1429566 | 20880.8 |
| hnh/endo vii superfamily nuclease | EDC56_1246 | Not Available | Negative | 1429563 - 1430195 | 24146.7 |
| Trna-arg | Not Available | Not Available | Positive | 1464772 - 1464848 | Not Available |
| hypothetical protein | EDC56_1293 | Not Available | Negative | 1464968 - 1465225 | 9700.5 |
| putative nicotinamide n-methyase | EDC56_1294 | Not Available | Negative | 1465311 - 1466027 | 26382.3 |
| hypothetical protein | EDC56_1295 | Not Available | Positive | 1466187 - 1466456 | 10031.1 |
| hypothetical protein | EDC56_1296 | Not Available | Negative | 1466531 - 1467088 | 21526.9 |
| trna pseudouridine32 synthase/23s rrna pseudouridine746 synthase | EDC56_1297 | Not Available | Positive | 1467243 - 1467896 | 24597.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
