Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superfamily ii dna/rna helicase | EDC56_1231 | Not Available | Negative | 1409199 - 1410488 | 46977.1 |
| hypothetical protein | EDC56_1232 | Not Available | Negative | 1410968 - 1411312 | 12090.4 |
| hypothetical protein | EDC56_1233 | Not Available | Negative | 1411393 - 1412925 | 55616.6 |
| 2-polyprenyl-6-methoxyphenol hydroxylase-like fad-dependent oxidoreductase | EDC56_1235 | Not Available | Positive | 1414688 - 1415860 | 42943.7 |
| hypothetical protein | EDC56_1237 | Not Available | Positive | 1416468 - 1419284 | 103570.0 |
| hypothetical protein | EDC56_1238 | Not Available | Negative | 1419597 - 1419752 | 6077.2 |
| hypothetical protein | EDC56_1239 | Not Available | Negative | 1419853 - 1420296 | 17336.4 |
| rhs repeat-associated protein | EDC56_1240 | Not Available | Negative | 1420299 - 1423067 | 102143.0 |
| yd repeat-containing protein | EDC56_1241 | Not Available | Negative | 1423128 - 1424726 | 58862.1 |
| yd repeat-containing protein | EDC56_1242 | Not Available | Negative | 1424769 - 1426307 | 57181.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
