Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonine 3-dehydrogenase | EDC56_1203 | Not Available | Negative | 1380393 - 1381430 | 37738.6 |
| 2-amino-3-ketobutyrate coenzyme a ligase | EDC56_1204 | Not Available | Negative | 1381430 - 1382638 | 43372.8 |
| gamma-glutamyltransferase 1 | EDC56_1205 | Not Available | Negative | 1382831 - 1384582 | 62754.1 |
| putative membrane protein yeih | EDC56_1206 | Not Available | Positive | 1384969 - 1385589 | 22664.5 |
| hypothetical protein | EDC56_1207 | Not Available | Negative | 1385687 - 1386502 | 31261.4 |
| snoal-like protein | EDC56_1225 | Not Available | Negative | 1402680 - 1403192 | 19704.5 |
| putative rdd family membrane protein yckc | EDC56_1226 | Not Available | Negative | 1403355 - 1403771 | 15859.6 |
| hypothetical protein | EDC56_1227 | Not Available | Negative | 1404141 - 1405895 | 65346.7 |
| hypothetical protein | EDC56_1228 | Not Available | Positive | 1406283 - 1406615 | 12241.2 |
| drug/metabolite transporter (dmt)-like permease | EDC56_1229 | Not Available | Positive | 1407026 - 1407871 | 30542.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
