Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor sulfurylase | EDC56_1183 | Not Available | Positive | 1356406 - 1357359 | 34480.7 |
| allantoinase | EDC56_1184 | Not Available | Positive | 1357356 - 1358732 | 49913.6 |
| 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | EDC56_1185 | Not Available | Positive | 1358958 - 1359458 | 18683.0 |
| 5-hydroxyisourate hydrolase | EDC56_1186 | Not Available | Positive | 1359455 - 1359799 | 12441.6 |
| ureidoglycolate lyase | EDC56_1187 | Not Available | Positive | 1359802 - 1360338 | 19454.9 |
| guanine deaminase | EDC56_1188 | Not Available | Positive | 1360335 - 1361681 | 50245.5 |
| putative membrane protein | EDC56_1189 | Not Available | Positive | 1361793 - 1362983 | 43674.4 |
| rnd family efflux transporter mfp subunit | EDC56_1190 | Not Available | Negative | 1363498 - 1364457 | 35317.0 |
| uncharacterized protein duf3302 | EDC56_1191 | Not Available | Negative | 1364457 - 1364816 | 13606.5 |
| ammonium transporter | EDC56_1192 | Not Available | Positive | 1365027 - 1367498 | 89998.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
