Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine-rich cwc protein | EDC56_1173 | Not Available | Positive | 1344490 - 1344765 | 10020.6 |
| cysz protein | EDC56_1174 | Not Available | Positive | 1344762 - 1345622 | 31998.7 |
| thiol-disulfide isomerase/thioredoxin | EDC56_1175 | Not Available | Positive | 1345799 - 1346458 | 24091.6 |
| gluconate 2-dehydrogenase gamma chain | EDC56_1176 | Not Available | Positive | 1346476 - 1347075 | 22344.2 |
| choline dehydrogenase-like flavoprotein | EDC56_1177 | Not Available | Positive | 1347075 - 1348781 | 62561.1 |
| tetr family transcriptional regulator | EDC56_1178 | Not Available | Negative | 1348801 - 1349463 | 24803.6 |
| nucleoside-specific outer membrane channel protein tsx | EDC56_1179 | Not Available | Negative | 1349617 - 1350504 | 32697.6 |
| alanine-glyoxylate transaminase/serine-glyoxylate transaminase/serine-pyruvate transaminase | EDC56_1180 | Not Available | Negative | 1350933 - 1352111 | 41573.0 |
| xanthine dehydrogenase small subunit | EDC56_1181 | Not Available | Positive | 1352583 - 1354064 | 54166.3 |
| xanthine dehydrogenase molybdenum binding subunit apoprotein | EDC56_1182 | Not Available | Positive | 1354057 - 1356402 | 84367.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
