Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaconate coa-transferase subunit b | EDC56_1163 | Not Available | Negative | 1334488 - 1335288 | 29060.6 |
| glutaconate coa-transferase subunit a | EDC56_1164 | Not Available | Negative | 1335335 - 1336210 | 32362.9 |
| lrp/asnc family transcriptional regulator for asna, asnc and gida | EDC56_1165 | Not Available | Negative | 1336483 - 1336950 | 17624.4 |
| lrp/asnc family transcriptional regulator for asna, asnc and gida | EDC56_1166 | Not Available | Negative | 1336987 - 1337487 | 18146.9 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | EDC56_1167 | Not Available | Negative | 1337515 - 1339101 | 56834.2 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | EDC56_1168 | Not Available | Negative | 1339339 - 1340187 | 31033.3 |
| hypothetical protein | EDC56_1169 | Not Available | Positive | 1340389 - 1342257 | 66153.5 |
| enoyl-[acyl-carrier protein] reductase/trans-2-enoyl-coa reductase (nad+) | EDC56_1170 | Not Available | Negative | 1342335 - 1343525 | 43192.3 |
| hypothetical protein | EDC56_1171 | Not Available | Negative | 1343827 - 1344090 | 10474.2 |
| hypothetical protein | EDC56_1172 | Not Available | Positive | 1344231 - 1344467 | 8883.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
