Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioester hydrolase | EDC56_0045 | Not Available | Positive | 41697 - 42140 | 16687.7 |
| prolyl oligopeptidase family protein | EDC56_0046 | Not Available | Positive | 42148 - 43980 | 67736.8 |
| late embryogenesis abundant protein | EDC56_0047 | Not Available | Positive | 44084 - 44572 | 17531.4 |
| atp dependent pim1 peptidase | EDC56_0048 | Not Available | Negative | 44845 - 47226 | 87910.9 |
| hypothetical protein | EDC56_0049 | Not Available | Positive | 47415 - 47987 | 21287.0 |
| putative porin | EDC56_0050 | Not Available | Positive | 48121 - 49149 | 37244.8 |
| hypothetical protein | EDC56_0051 | Not Available | Positive | 49242 - 49613 | 14030.7 |
| filamentous hemagglutinin family protein | EDC56_0054 | Not Available | Negative | 54245 - 57226 | 103997.0 |
| hemolysin activation/secretion protein | EDC56_0055 | Not Available | Negative | 57261 - 59210 | 72163.7 |
| nitroreductase/dihydropteridine reductase | EDC56_0056 | Not Available | Negative | 59878 - 60519 | 23640.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
