Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_1127 | Not Available | Negative | 1297702 - 1298181 | 18100.6 |
| hypothetical protein | EDC56_1128 | Not Available | Negative | 1298662 - 1299249 | 21632.1 |
| phospholipid transport system substrate-binding protein | EDC56_1129 | Not Available | Positive | 1299789 - 1300490 | 26673.1 |
| acyl dehydratase | EDC56_1130 | Not Available | Negative | 1300633 - 1301103 | 17245.7 |
| hypothetical protein | EDC56_1133 | Not Available | Negative | 1302598 - 1303167 | 20899.7 |
| hypothetical protein | EDC56_1134 | Not Available | Negative | 1303182 - 1303307 | 4452.41 |
| rimj/riml family protein n-acetyltransferase | EDC56_1135 | Not Available | Negative | 1303545 - 1304132 | 22039.8 |
| putative secreted protein | EDC56_1137 | Not Available | Negative | 1305344 - 1305910 | 20167.5 |
| putative zinc ribbon protein | EDC56_1140 | Not Available | Negative | 1307916 - 1308401 | 18630.2 |
| uncharacterized protein duf4288 | EDC56_1141 | Not Available | Negative | 1309208 - 1309549 | 13294.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
