Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surface protein | EDC56_1092 | Not Available | Positive | 1261929 - 1263821 | 70336.6 |
| surface protein | EDC56_1094 | Not Available | Positive | 1264399 - 1266252 | 69662.3 |
| hypothetical protein | EDC56_1095 | Not Available | Negative | 1266480 - 1266875 | 14879.8 |
| transporter (nhac family) | EDC56_1096 | Not Available | Positive | 1267611 - 1269083 | 52257.1 |
| isoaspartyl dipeptidase | EDC56_1097 | Not Available | Positive | 1269094 - 1270248 | 41226.6 |
| hypothetical protein | EDC56_1098 | Not Available | Negative | 1270342 - 1270818 | 17624.3 |
| hypothetical protein | EDC56_1099 | Not Available | Negative | 1270818 - 1270928 | 4173.27 |
| threonine/homoserine/homoserine lactone efflux protein | EDC56_1101 | Not Available | Negative | 1271420 - 1272055 | 22583.8 |
| hypothetical protein | EDC56_1102 | Not Available | Negative | 1272122 - 1272490 | 13838.5 |
| surface polysaccharide o-acyltransferase-like enzyme | EDC56_1103 | Not Available | Negative | 1272809 - 1273834 | 38896.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
