Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ergothioneine biosynthesis protein egtb | EDC56_1082 | Not Available | Negative | 1249272 - 1250585 | 50322.9 |
| putative phzf superfamily epimerase ydde/yhi9 | EDC56_1083 | Not Available | Negative | 1250582 - 1251373 | 29084.7 |
| eal domain-containing protein (putative c-di-gmp-specific phosphodiesterase class i) | EDC56_1084 | Not Available | Negative | 1251733 - 1252941 | 44907.0 |
| hypothetical protein | EDC56_1085 | Not Available | Negative | 1253279 - 1253761 | 18032.4 |
| hypothetical protein | EDC56_1086 | Not Available | Negative | 1253919 - 1254998 | 39581.0 |
| chitodextrinase | EDC56_1087 | Not Available | Positive | 1255693 - 1256925 | 45385.3 |
| 8-oxoguanine deaminase | EDC56_1088 | Not Available | Negative | 1257088 - 1258446 | 49037.4 |
| xanthine permease xanp | EDC56_1089 | Not Available | Negative | 1258680 - 1260206 | 52961.0 |
| aspartate racemase | EDC56_1090 | Not Available | Negative | 1260500 - 1261195 | 25874.6 |
| cytochrome c553 | EDC56_1091 | Not Available | Negative | 1261292 - 1261594 | 10464.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
