Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exosortase d (vplpa-cterm-specific) | EDC56_0035 | Not Available | Negative | 31244 - 32845 | 60112.1 |
| type ii secretory pathway predicted atpase exea | EDC56_0036 | Not Available | Negative | 32926 - 33828 | 33441.1 |
| capsular exopolysaccharide synthesis family protein | EDC56_0037 | Not Available | Negative | 33840 - 34628 | 28909.9 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | EDC56_0038 | Not Available | Negative | 34639 - 36402 | 66353.4 |
| hypothetical protein | EDC56_0039 | Not Available | Negative | 36421 - 37731 | 49361.2 |
| polysaccharide export outer membrane protein | EDC56_0040 | Not Available | Negative | 37777 - 38352 | 20464.5 |
| d-fructose 1,6-bisphosphatase | EDC56_0041 | Not Available | Positive | 38682 - 39653 | 35388.5 |
| tatd dnase family protein | EDC56_0042 | Not Available | Negative | 39646 - 40425 | 28546.5 |
| methyltransferase family protein | EDC56_0043 | Not Available | Positive | 40471 - 41121 | 25119.9 |
| hypothetical protein | EDC56_0044 | Not Available | Positive | 41401 - 41577 | 6380.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
