Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-erythro-7,8-dihydroneopterin triphosphate epimerase | EDC56_1017 | Not Available | Negative | 1182425 - 1182787 | 13733.6 |
| cystatin-like protein | EDC56_1018 | Not Available | Positive | 1183016 - 1183411 | 14054.0 |
| limonene-1,2-epoxide hydrolase | EDC56_1019 | Not Available | Negative | 1183511 - 1183909 | 15404.5 |
| uncharacterized protein (duf2132 family) | EDC56_1020 | Not Available | Negative | 1183952 - 1184497 | 20958.8 |
| carbon storage regulator csra | EDC56_1021 | Not Available | Positive | 1184966 - 1185319 | 13318.9 |
| peptidylprolyl isomerase | EDC56_1022 | Not Available | Positive | 1185439 - 1185777 | 12356.0 |
| sterol 14-demethylase | EDC56_1023 | Not Available | Negative | 1185812 - 1187164 | 52368.6 |
| acetyltransferase (gnat) family protein | EDC56_1024 | Not Available | Negative | 1187475 - 1187972 | 18616.9 |
| tfda family taurine catabolism dioxygenase taud | EDC56_1025 | Not Available | Positive | 1188616 - 1189404 | 30060.1 |
| hypothetical protein | EDC56_1026 | Not Available | Positive | 1189407 - 1190165 | 26919.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
