Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | EDC56_1007 | Not Available | Negative | 1169876 - 1170967 | 40107.6 |
| dha2 family multidrug resistance protein | EDC56_1008 | Not Available | Negative | 1171118 - 1172626 | 54783.6 |
| membrane fusion protein (multidrug efflux system) | EDC56_1009 | Not Available | Negative | 1172626 - 1173645 | 36879.4 |
| hypothetical protein | EDC56_1010 | Not Available | Positive | 1174125 - 1174640 | 20120.7 |
| uncharacterized protein involved in response to no | EDC56_1011 | Not Available | Positive | 1174867 - 1176153 | 47059.9 |
| putative mfs family arabinose efflux permease | EDC56_1012 | Not Available | Negative | 1176204 - 1177562 | 48488.4 |
| merr family redox-sensitive transcriptional activator soxr | EDC56_1013 | Not Available | Positive | 1177784 - 1178239 | 16990.7 |
| hypothetical protein | EDC56_1014 | Not Available | Negative | 1178275 - 1178559 | 10314.8 |
| hypothetical protein | EDC56_1015 | Not Available | Positive | 1178746 - 1179909 | 45009.1 |
| signal transduction histidine kinase | EDC56_1016 | Not Available | Negative | 1179906 - 1182350 | 91111.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
