Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | EDC56_0977 | Not Available | Negative | 1129273 - 1129824 | 20406.8 |
| threonine/homoserine/homoserine lactone efflux protein | EDC56_0978 | Not Available | Positive | 1129826 - 1130422 | 21544.0 |
| putative secreted protein | EDC56_0979 | Not Available | Positive | 1130618 - 1131400 | 28157.9 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | EDC56_0980 | Not Available | Negative | 1131469 - 1133397 | 65830.7 |
| pyruvate dehydrogenase e1 component | EDC56_0981 | Not Available | Negative | 1133487 - 1136126 | 98990.5 |
| secreted zn-dependent insulinase-like peptidase | EDC56_0982 | Not Available | Negative | 1136851 - 1139736 | 107528.0 |
| putative permease | EDC56_0983 | Not Available | Negative | 1139758 - 1140837 | 39404.8 |
| tusa-related sulfurtransferase | EDC56_0984 | Not Available | Negative | 1140914 - 1141132 | 7947.48 |
| putative zn-dependent protease | EDC56_0985 | Not Available | Positive | 1141350 - 1142819 | 54364.5 |
| malate synthase | EDC56_0986 | Not Available | Positive | 1143148 - 1145322 | 79103.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
