Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-aminoethylphosphonate--pyruvate transaminase | EDC56_0957 | Not Available | Positive | 1110150 - 1111262 | 40787.6 |
| 4-aminobutyrate aminotransferase | EDC56_0958 | Not Available | Positive | 1111252 - 1112670 | 51371.5 |
| phosphonoacetaldehyde hydrolase | EDC56_0959 | Not Available | Positive | 1112685 - 1113500 | 29389.1 |
| 2-polyprenyl-6-methoxyphenol hydroxylase-like fad-dependent oxidoreductase | EDC56_0960 | Not Available | Negative | 1113516 - 1114718 | 44912.6 |
| putative co/zn/cd cation transporter (cation efflux family) | EDC56_0961 | Not Available | Negative | 1115017 - 1116015 | 36940.6 |
| uncharacterized membrane protein yhah (duf805 family) | EDC56_0962 | Not Available | Negative | 1116059 - 1116400 | 13247.2 |
| hypothetical protein | EDC56_0963 | Not Available | Negative | 1116613 - 1117362 | 26222.1 |
| threonine/homoserine/homoserine lactone efflux protein | EDC56_0964 | Not Available | Negative | 1117479 - 1118114 | 22891.3 |
| hypothetical protein | EDC56_0965 | Not Available | Negative | 1118278 - 1119408 | 41893.5 |
| dopa 4,5-dioxygenase | EDC56_0966 | Not Available | Negative | 1120060 - 1120416 | 13688.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
