Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphocarrier protein | EDC56_0025 | Not Available | Positive | 20102 - 20371 | 9691.73 |
| magnesium transporter | EDC56_0026 | Not Available | Positive | 20528 - 21886 | 49366.8 |
| ribosome-associated protein | EDC56_0027 | Not Available | Positive | 21948 - 22454 | 19603.7 |
| serine o-acetyltransferase | EDC56_0028 | Not Available | Negative | 22451 - 23227 | 27355.8 |
| phosphoglycolate phosphatase | EDC56_0029 | Not Available | Negative | 23220 - 23885 | 24011.7 |
| las superfamily ld-carboxypeptidase ldcb | EDC56_0030 | Not Available | Negative | 23890 - 24579 | 25967.8 |
| dna transformation protein | EDC56_0031 | Not Available | Positive | 24744 - 25022 | 10391.4 |
| trna(met)-cytidine n(4)-acetyltransferase | EDC56_0032 | Not Available | Negative | 25034 - 27115 | 76422.3 |
| flp pilus assembly protein tadd | EDC56_0033 | Not Available | Negative | 27161 - 29557 | 89524.7 |
| udp-glcnac:undecaprenyl-phosphate glcnac-1-phosphate transferase | EDC56_0034 | Not Available | Negative | 29569 - 31206 | 61069.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
