Raoultella terrigena strain BIGb0188

Rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Raoultella terrigena strain BIGb0188 is a Gram-negative, rod-shaped bacterium that demonstrates facultative anaerobic characteristics, allowing it to thrive in both aerobic and anaerobic environments. This strain is equipped with flagella, which facilitate motility in various habitats, including fresh water, milk, plants, and soil. In terms of genetic makeup, Raoultella terrigena strain BIGb0188 contains one replicon, with its genetic information cataloged under the accession RKHP00000000.1. This strain has been identified as a potential opportunistic pathogen in humans, associated with several health issues such as urinary tract infections, sepsis, and subdural abscesses. It can also infect nematodes, indicating its versatility as a host-associated organism. The ecological role of Raoultella terrigena strain BIGb0188 is underscored by its presence in diverse environments, suggesting that it may participate in nutrient cycling and interactions within microbial communities. Its ability to cause opportunistic infections, particularly in immunocompromised individuals, highlights the importance of understanding its ecological niches and the potential health risks it poses. This duality of being a benign environmental inhabitant while also capable of causing disease emphasizes the need for monitoring and further research into its pathogenic potential and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella terrigena
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Raoultella terrigena strain BIGb0188
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water; milk; plants; soil
Biotic relationshipNot Available
Host(s)Homo sapiens, Nematoda
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Raoultella terrigena strain BIGb0188 Ga0304796_109, whole genome

Gene Summary

Adenine Count

1229820 bp

Thymine Count

1217789 bp

Guanine Count

1637070 bp

Cytosine Count

1658245 bp

Genome Length

5744092 bp

Protein-coding Genes

5151 genes

Non-Coding Genes

219 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter membrane protein 1 (paat family)EDF76_0139Not AvailableNegative125143 - 12589527360.5
amino acid abc transporter atp-binding protein (paat family)EDF76_0140Not AvailableNegative125892 - 12671029769.9
Ncrna_class:otherNot AvailableNot AvailablePositive127119 - 127195Not Available
amino acid abc transporter substrate-binding protein (paat family)EDF76_0141Not AvailableNegative126712 - 12752128725.7
hypothetical proteinEDF76_0142Not AvailablePositive127795 - 1279716841.29
ethanolamine ammonia-lyase light chainEDF76_0143Not AvailableNegative128078 - 12885728250.9
ethanolamine ammonia-lyase heavy chainEDF76_0144Not AvailableNegative128869 - 13024249370.4
ethanolamine:proton symporter (eat family)EDF76_0145Not AvailableNegative130252 - 13163149084.2
Ncrna_class:otherNot AvailableNot AvailablePositive132156 - 132300Not Available
glycosyl hydrolase family 28EDF76_0146Not AvailableNegative131941 - 13332350002.0

Displaying genes 271 – 280 of 5370 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Opportunistic disease in humansCausesPMC6606901
Opportunistic human infectionsCausesPMC6606901
SepsisCausesPMC6717099
Urinary tract infectionCausesPMC6717099
Subdural abscessCausesPMC6717099

Displaying health effects 1 – 5 of 5 in total