Plantibacter flavus strain DSM 14012

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Plantibacter

Description

Plantibacter flavus strain DSM 14012 is characterized by having a single replicon, which suggests a streamlined genomic organization. The strain is cataloged under the accession number RKHL00000000.1, indicating that it has been sequenced and is available for further study. This accessibility allows for insights into its genetic make-up and potential functionalities. As a member of the genus Plantibacter, this strain is likely involved in various ecological processes, particularly in soil and plant-associated environments. Members of the Plantibacter genus are typically known for their roles in nutrient cycling and interactions with plant roots, which may enhance plant growth or contribute to soil health. The presence of only one replicon may indicate a level of genomic simplicity that could be advantageous for rapid adaptation to environmental changes, although specific adaptive traits are not provided. The study of Plantibacter flavus DSM 14012, therefore, holds potential for understanding its ecological roles and contributions to microbial communities, particularly in relation to plant interactions. Further research could elucidate its functional capabilities and significance in its native habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusPlantibacter
SpeciesPlantibacter flavus
Strainstrain DSM 14012

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Plantibacter flavus strain DSM 14012 Ga0197524_12, whole genome

Gene Summary

Adenine Count

671015 bp

Thymine Count

664882 bp

Guanine Count

1488851 bp

Cytosine Count

1493019 bp

Genome Length

4317841 bp

Protein-coding Genes

3982 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rimj/riml family protein n-acetyltransferaseEDD42_0110Not AvailableNegative114978 - 11545116546.5
hypothetical proteinEDD42_0111Not AvailableNegative115539 - 1157728309.53
membrane protease ydil (caax protease family)EDD42_0112Not AvailablePositive115868 - 11677331852.8
dna-binding transcriptional merr regulatorEDD42_0113Not AvailablePositive116770 - 11747425931.5
ser/thr protein kinase rdoa (mazf antagonist)EDD42_0114Not AvailableNegative117562 - 11837128969.2
mannose-6-phosphate isomerase-like protein (cupin superfamily)EDD42_0115Not AvailablePositive118529 - 11891214106.8
adp-ribose pyrophosphataseEDD42_0116Not AvailablePositive119023 - 11952918369.0
hypothetical proteinEDD42_0117Not AvailablePositive119610 - 12006816877.0
arginaseEDD42_0118Not AvailablePositive120155 - 12108132293.1
aryl-alcohol dehydrogenase-like predicted oxidoreductaseEDD42_0119Not AvailableNegative121213 - 12219335247.6

Displaying genes 161 – 170 of 4073 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.