UNVERIFIED_ORG: Pseudomonas psychrophila strain BIGb0477

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas psychrophila strain BIGb0477 is a psychrotolerant bacterium primarily found in compost pile habitats. This strain is notable for its aerobic oxygen requirement, indicating that it thrives in environments where oxygen is present. The psychrotolerant nature of Pseudomonas psychrophila allows it to grow at low temperatures, making it particularly well-suited for colder environments. The strain has been characterized by having a single replicon, which may reflect its genomic stability and adaptability in its compost habitat. This characteristic could be significant for its survival and functioning within complex microbial communities typically found in compost piles. Pseudomonas species are known for their metabolic versatility, and their presence in compost piles suggests they may play a vital role in the decomposition process, contributing to nutrient cycling and organic matter breakdown. The ability of Pseudomonas psychrophila to thrive at low temperatures enhances its ecological significance, especially in composting systems that may experience cooler temperatures. The data indicate that this strain could be a valuable component of biological activities in cold composting environments, aiding in the efficient recycling of organic materials and improving the overall health of soil ecosystems. The unique traits of Pseudomonas psychrophila strain BIGb0477 highlight its potential utility in biotechnological applications, particularly in cold-adapted processes where maintaining aerobic conditions is essential for optimal microbial activity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas psychrophila
StrainUNVERIFIED_ORG: strain BIGb0477

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of UNVERIFIED_ORG: Pseudomonas psychrophila strain BIGb0477
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangepsychrotolerant
Habitatcompost pile
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

UNVERIFIED_ORG: Pseudomonas psychrophila strain BIGb0477

Gene Summary

Adenine Count

1175814 bp

Thymine Count

1207864 bp

Guanine Count

1694910 bp

Cytosine Count

1624808 bp

Genome Length

5704821 bp

Protein-coding Genes

4995 genes

Non-Coding Genes

263 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phospholipid/cholesterol/gamma-hch transport system substrate-binding proteinEDF86_2898Not AvailableNegative3161407 - 316234533476.1
phospholipid/cholesterol/gamma-hch transport system atp-binding proteinEDF86_2899Not AvailableNegative3162347 - 316315029023.1
phospholipid/cholesterol/gamma-hch transport system permease proteinEDF86_2900Not AvailableNegative3163147 - 316430140885.7
broad specificity polyphosphatase/5'/3'-nucleotidase sureEDF86_2901Not AvailableNegative3164357 - 316540039318.4
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathwayEDF86_2902Not AvailableNegative3165608 - 316627323700.6
fad/fmn-containing dehydrogenaseEDF86_2903Not AvailableNegative3166297 - 316771551951.3
d-3-phosphoglycerate dehydrogenaseEDF86_2904Not AvailablePositive3167898 - 316912744076.2
uncharacterized protein duf4399EDF86_2905Not AvailableNegative3169184 - 316960914666.7
amino acid abc transporter substrate-binding protein (paat family)EDF86_2906Not AvailablePositive3169748 - 317024818284.6
mono/diheme cytochrome c family proteinEDF86_2907Not AvailableNegative3170307 - 317156044905.1

Displaying genes 2951 – 2960 of 5267 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.