UNVERIFIED_ORG: Pseudomonas psychrophila strain BIGb0477

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas psychrophila strain BIGb0477 is a psychrotolerant bacterium primarily found in compost pile habitats. This strain is notable for its aerobic oxygen requirement, indicating that it thrives in environments where oxygen is present. The psychrotolerant nature of Pseudomonas psychrophila allows it to grow at low temperatures, making it particularly well-suited for colder environments. The strain has been characterized by having a single replicon, which may reflect its genomic stability and adaptability in its compost habitat. This characteristic could be significant for its survival and functioning within complex microbial communities typically found in compost piles. Pseudomonas species are known for their metabolic versatility, and their presence in compost piles suggests they may play a vital role in the decomposition process, contributing to nutrient cycling and organic matter breakdown. The ability of Pseudomonas psychrophila to thrive at low temperatures enhances its ecological significance, especially in composting systems that may experience cooler temperatures. The data indicate that this strain could be a valuable component of biological activities in cold composting environments, aiding in the efficient recycling of organic materials and improving the overall health of soil ecosystems. The unique traits of Pseudomonas psychrophila strain BIGb0477 highlight its potential utility in biotechnological applications, particularly in cold-adapted processes where maintaining aerobic conditions is essential for optimal microbial activity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas psychrophila
StrainUNVERIFIED_ORG: strain BIGb0477

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of UNVERIFIED_ORG: Pseudomonas psychrophila strain BIGb0477
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangepsychrotolerant
Habitatcompost pile
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

UNVERIFIED_ORG: Pseudomonas psychrophila strain BIGb0477

Gene Summary

Adenine Count

1175814 bp

Thymine Count

1207864 bp

Guanine Count

1694910 bp

Cytosine Count

1624808 bp

Genome Length

5704821 bp

Protein-coding Genes

4995 genes

Non-Coding Genes

263 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate transport system permease proteinEDF86_2617Not AvailableNegative2876839 - 287850960702.2
phosphate transport system permease proteinEDF86_2618Not AvailableNegative2878525 - 288081083668.5
phosphate abc transporter substrate-binding protein (phot family)EDF86_2619Not AvailableNegative2881008 - 288199434750.6
putative mfs family arabinose efflux permeaseEDF86_2620Not AvailableNegative2882160 - 288344946379.2
acyl-coa thioesterase yciaEDF86_2621Not AvailablePositive2883823 - 288422414400.4
glucose-6-phosphate 1-epimeraseEDF86_2622Not AvailablePositive2884250 - 288514633312.4
hypothetical proteinEDF86_2623Not AvailableNegative2885226 - 288576219428.8
putative membrane protein yeaq/ymge (transglycosylase-associated protein family)EDF86_2624Not AvailableNegative2885843 - 28860918337.72
5-(carboxyamino)imidazole ribonucleotide synthaseEDF86_2625Not AvailableNegative2886196 - 288728138826.3
5-(carboxyamino)imidazole ribonucleotide mutaseEDF86_2626Not AvailableNegative2887293 - 288778416844.6

Displaying genes 2681 – 2690 of 5267 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.