Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas psychrophila |
| Strain | UNVERIFIED_ORG: strain BIGb0477 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | psychrotolerant |
| Habitat | compost pile |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1175814 bp
Thymine Count
1207864 bp
Guanine Count
1694910 bp
Cytosine Count
1624808 bp
Genome Length
5704821 bp
Protein-coding Genes
4995 genes
Non-Coding Genes
263 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein impc | EDF86_1994 | Not Available | Negative | 2179340 - 2180818 | 55665.0 |
| type vi secretion system protein impb | EDF86_1995 | Not Available | Negative | 2180897 - 2181412 | 18849.6 |
| type vi secretion system protein vasi | EDF86_1996 | Not Available | Positive | 2181745 - 2182419 | 24554.9 |
| type vi secretion system protein vasj | EDF86_1997 | Not Available | Positive | 2182407 - 2183840 | 52697.2 |
| type vi secretion system protein impl | EDF86_1998 | Not Available | Positive | 2183850 - 2187494 | 137580.0 |
| zn-dependent oligopeptidase | EDF86_1999 | Not Available | Positive | 2187599 - 2193709 | 227442.0 |
| lysr family transcriptional regulator | EDF86_2000 | Not Available | Negative | 2193703 - 2194605 | 33479.0 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | EDF86_2001 | Not Available | Positive | 2194731 - 2195471 | 25143.3 |
| 4-oxalocrotonate tautomerase | EDF86_2002 | Not Available | Positive | 2195489 - 2195713 | 8355.02 |
| fatty acid desaturase | EDF86_2003 | Not Available | Positive | 2195977 - 2196918 | 36842.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





