UNVERIFIED_ORG: Pseudomonas psychrophila strain BIGb0477

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas psychrophila strain BIGb0477 is a psychrotolerant bacterium primarily found in compost pile habitats. This strain is notable for its aerobic oxygen requirement, indicating that it thrives in environments where oxygen is present. The psychrotolerant nature of Pseudomonas psychrophila allows it to grow at low temperatures, making it particularly well-suited for colder environments. The strain has been characterized by having a single replicon, which may reflect its genomic stability and adaptability in its compost habitat. This characteristic could be significant for its survival and functioning within complex microbial communities typically found in compost piles. Pseudomonas species are known for their metabolic versatility, and their presence in compost piles suggests they may play a vital role in the decomposition process, contributing to nutrient cycling and organic matter breakdown. The ability of Pseudomonas psychrophila to thrive at low temperatures enhances its ecological significance, especially in composting systems that may experience cooler temperatures. The data indicate that this strain could be a valuable component of biological activities in cold composting environments, aiding in the efficient recycling of organic materials and improving the overall health of soil ecosystems. The unique traits of Pseudomonas psychrophila strain BIGb0477 highlight its potential utility in biotechnological applications, particularly in cold-adapted processes where maintaining aerobic conditions is essential for optimal microbial activity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas psychrophila
StrainUNVERIFIED_ORG: strain BIGb0477

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of UNVERIFIED_ORG: Pseudomonas psychrophila strain BIGb0477
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangepsychrotolerant
Habitatcompost pile
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

UNVERIFIED_ORG: Pseudomonas psychrophila strain BIGb0477

Gene Summary

Adenine Count

1175814 bp

Thymine Count

1207864 bp

Guanine Count

1694910 bp

Cytosine Count

1624808 bp

Genome Length

5704821 bp

Protein-coding Genes

4995 genes

Non-Coding Genes

263 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
kipi family sensor histidine kinase inhibitorEDF86_1843Not AvailableNegative2000307 - 200101425179.5
putative marr family transcription regulatorEDF86_1844Not AvailableNegative2001320 - 200185319303.4
rraa family proteinEDF86_1845Not AvailablePositive2002205 - 200287323200.4
glycerate dehydrogenaseEDF86_1846Not AvailablePositive2002870 - 200382034027.2
catechol 2,3-dioxygenase-like lactoylglutathione lyase family enzymeEDF86_1847Not AvailablePositive2003909 - 200430114486.7
sugar phosphate permeaseEDF86_1848Not AvailablePositive2004593 - 200593647781.0
dna-binding transcriptional lysr family regulatorEDF86_1849Not AvailableNegative2006006 - 200690532905.4
rraa family proteinEDF86_1850Not AvailablePositive2007005 - 200763121512.0
3-hydroxyisobutyrate dehydrogenase-like beta-hydroxyacid dehydrogenaseEDF86_1851Not AvailablePositive2007647 - 200851630326.7
e3 ligase-like protein (putative virulence factor)EDF86_1852Not AvailablePositive2008648 - 2015598256220.0

Displaying genes 1931 – 1940 of 5267 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.