UNVERIFIED_ORG: Pseudomonas psychrophila strain BIGb0477

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas psychrophila strain BIGb0477 is a psychrotolerant bacterium primarily found in compost pile habitats. This strain is notable for its aerobic oxygen requirement, indicating that it thrives in environments where oxygen is present. The psychrotolerant nature of Pseudomonas psychrophila allows it to grow at low temperatures, making it particularly well-suited for colder environments. The strain has been characterized by having a single replicon, which may reflect its genomic stability and adaptability in its compost habitat. This characteristic could be significant for its survival and functioning within complex microbial communities typically found in compost piles. Pseudomonas species are known for their metabolic versatility, and their presence in compost piles suggests they may play a vital role in the decomposition process, contributing to nutrient cycling and organic matter breakdown. The ability of Pseudomonas psychrophila to thrive at low temperatures enhances its ecological significance, especially in composting systems that may experience cooler temperatures. The data indicate that this strain could be a valuable component of biological activities in cold composting environments, aiding in the efficient recycling of organic materials and improving the overall health of soil ecosystems. The unique traits of Pseudomonas psychrophila strain BIGb0477 highlight its potential utility in biotechnological applications, particularly in cold-adapted processes where maintaining aerobic conditions is essential for optimal microbial activity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas psychrophila
StrainUNVERIFIED_ORG: strain BIGb0477

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of UNVERIFIED_ORG: Pseudomonas psychrophila strain BIGb0477
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangepsychrotolerant
Habitatcompost pile
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

UNVERIFIED_ORG: Pseudomonas psychrophila strain BIGb0477

Gene Summary

Adenine Count

1175814 bp

Thymine Count

1207864 bp

Guanine Count

1694910 bp

Cytosine Count

1624808 bp

Genome Length

5704821 bp

Protein-coding Genes

4995 genes

Non-Coding Genes

263 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphocarrier proteinEDF86_1174Not AvailableNegative1312801 - 13130739747.0
upf0042 nucleotide-binding proteinEDF86_1175Not AvailableNegative1313090 - 131394732169.6
phosphotransferase iia-like nitrogen-regulatory protein ptsnEDF86_1176Not AvailableNegative1313950 - 131441416722.3
ssu ribosomal protein s30p /sigma 54 modulation proteinEDF86_1177Not AvailableNegative1314427 - 131473511498.8
rna polymerase rpon-/sigl-like sigma 54 subunitEDF86_1178Not AvailableNegative1314811 - 131628355761.7
lipopolysaccharide export system atp-binding proteinEDF86_1179Not AvailableNegative1316532 - 131725726609.3
lipopolysaccharide export system protein lptaEDF86_1180Not AvailableNegative1317257 - 131780219443.3
lipopolysaccharide export system protein lptcEDF86_1181Not AvailableNegative1317789 - 131836121416.6
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)EDF86_1182Not AvailableNegative1318370 - 131889418852.8
arabinose-5-phosphate isomeraseEDF86_1183Not AvailableNegative1318894 - 132011743566.3

Displaying genes 1301 – 1310 of 5267 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.