Caminibacter pacificus strain DSM 27783

rod

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Nautiliales

Family

Nautiliaceae

Genus

Caminibacter

Description

Caminibacter pacificus strain DSM 27783 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain has been identified and cataloged under the accession number RJVK00000000.1. It is noteworthy that Caminibacter pacificus possesses a single replicon, which is significant for its genetic stability and replication processes. The classification of Caminibacter pacificus as a Gram-negative organism indicates that it has a thin peptidoglycan layer and an outer membrane, which can impact its interactions within various environments. This structural characteristic often influences the bacterium's susceptibility to antibiotics and its ability to thrive in different ecological niches. Biologically, the traits of Caminibacter pacificus suggest that it may play a role in specific ecological processes, particularly in marine environments where other similar microorganisms are found. The presence of a single replicon may facilitate efficient replication in stable habitats, which could be advantageous in nutrient-rich settings. Overall, the characteristics of Caminibacter pacificus strain DSM 27783 provide insight into its potential ecological roles and contributions to microbial diversity in its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderNautiliales
FamilyNautiliaceae
GenusCaminibacter
SpeciesCaminibacter pacificus
Strainstrain DSM 27783

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caminibacter pacificus strain DSM 27783 Ga0244704_18, whole genome

Gene Summary

Adenine Count

616111 bp

Thymine Count

612886 bp

Guanine Count

309708 bp

Cytosine Count

319546 bp

Genome Length

1858776 bp

Protein-coding Genes

1956 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferaseEDC58_0229Not AvailablePositive211369 - 21231934487.0
cysteine desulfuraseEDC58_0230Not AvailablePositive212390 - 21356543365.8
modular fes cluster scaffolding protein nifuEDC58_0231Not AvailablePositive213640 - 21460536112.7
eal domain-containing protein (putative c-di-gmp-specific phosphodiesterase class i)EDC58_0232Not AvailablePositive214652 - 21665278374.8
l-aspartate oxidaseEDC58_0233Not AvailableNegative216649 - 21820256730.4
plasminogen-binding protein pgba-likeEDC58_0234Not AvailablePositive218254 - 21888023977.3
glycolate oxidaseEDC58_0235Not AvailablePositive218882 - 22026450275.8
hypothetical proteinEDC58_0236Not AvailablePositive220267 - 2204376675.43
exodeoxyribonuclease-3EDC58_0237Not AvailablePositive220439 - 22119729784.8
membrane protein deda with snare-associated domainEDC58_0238Not AvailablePositive221206 - 22178721399.8

Displaying genes 231 – 240 of 1672 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.