Caminibacter pacificus strain DSM 27783

rod

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Nautiliales

Family

Nautiliaceae

Genus

Caminibacter

Description

Caminibacter pacificus strain DSM 27783 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain has been identified and cataloged under the accession number RJVK00000000.1. It is noteworthy that Caminibacter pacificus possesses a single replicon, which is significant for its genetic stability and replication processes. The classification of Caminibacter pacificus as a Gram-negative organism indicates that it has a thin peptidoglycan layer and an outer membrane, which can impact its interactions within various environments. This structural characteristic often influences the bacterium's susceptibility to antibiotics and its ability to thrive in different ecological niches. Biologically, the traits of Caminibacter pacificus suggest that it may play a role in specific ecological processes, particularly in marine environments where other similar microorganisms are found. The presence of a single replicon may facilitate efficient replication in stable habitats, which could be advantageous in nutrient-rich settings. Overall, the characteristics of Caminibacter pacificus strain DSM 27783 provide insight into its potential ecological roles and contributions to microbial diversity in its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderNautiliales
FamilyNautiliaceae
GenusCaminibacter
SpeciesCaminibacter pacificus
Strainstrain DSM 27783

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caminibacter pacificus strain DSM 27783 Ga0244704_18, whole genome

Gene Summary

Adenine Count

616111 bp

Thymine Count

612886 bp

Guanine Count

309708 bp

Cytosine Count

319546 bp

Genome Length

1858776 bp

Protein-coding Genes

1956 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide chain release factor 2 (brf-2)EDC58_1012Not AvailableNegative945513 - 94662242481.1
pantoate--beta-alanine ligaseEDC58_1013Not AvailablePositive946722 - 94754031147.8
murein l,d-transpeptidase yafkEDC58_1014Not AvailablePositive947550 - 94851237858.1
hypothetical proteinEDC58_1015Not AvailableNegative948513 - 9487529346.1
ssu ribosomal protein s12p methylthiotransferaseEDC58_1016Not AvailablePositive948813 - 95011449864.5
trna(ile)-lysidine synthaseEDC58_1017Not AvailablePositive950095 - 95103337798.7
calcineurin-like phosphoesterase family proteinEDC58_1018Not AvailablePositive951021 - 95171627198.8
Trna-metNot AvailableNot AvailablePositive951759 - 951835Not Available
Trna-pheNot AvailableNot AvailablePositive951845 - 951920Not Available
phosphoribosylglycinamide formyltransferase-1EDC58_1021Not AvailablePositive952085 - 95259419215.5

Displaying genes 1011 – 1020 of 1672 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.