Comamonas sp. BIGb0124

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas sp. BIGb0124 is a rod-shaped bacterium characterized by the presence of flagella, which are important for motility. This species has been identified with a single replicon, indicating a relatively simple genomic structure. The genetic information for Comamonas sp. BIGb0124 can be accessed through the accession number RJVF00000000.1, which serves as a reference for further study and analysis. Comamonas species are known for their versatility in various environments, often thriving in soil and water ecosystems. Their motility, facilitated by flagella, may enhance their ability to colonize diverse niches and utilize a range of substrates. This capability suggests that Comamonas sp. BIGb0124 might play a role in biogeochemical cycles, particularly in the degradation of organic compounds, which is a common trait among members of this genus. The presence of a single replicon may also indicate a streamlined genomic organization, potentially reflecting adaptations to specific ecological niches. Understanding the traits and ecological roles of Comamonas sp. BIGb0124 can provide insights into its contributions to microbial communities and ecosystem functioning, especially in contexts where organic matter degradation is essential for nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas sp. BIGb0124
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas sp. BIGb0124 Ga0304810_109, whole genome shotgun

Gene Summary

Adenine Count

850166 bp

Thymine Count

848769 bp

Guanine Count

1626199 bp

Cytosine Count

1633719 bp

Genome Length

4959933 bp

Protein-coding Genes

4304 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ammonium transporterEC845_4409Not AvailablePositive4895563 - 489687344357.8
aldose 1-epimeraseEC845_4410Not AvailablePositive4897140 - 489804533042.3
sugar lactone lactonase yvreEC845_4411Not AvailablePositive4898105 - 489916638654.4
glycolate oxidase fad binding subunitEC845_4412Not AvailablePositive4899388 - 490057240544.3
uncharacterized membrane protein yoak (upf0700 family)EC845_4413Not AvailablePositive4900585 - 490139129400.6
glycolate oxidase iron-sulfur subunitEC845_4414Not AvailablePositive4901408 - 490269145969.7
putative mapeg superfamily proteinEC845_4415Not AvailablePositive4902731 - 490312313957.3
heat shock protein hsp15EC845_4416Not AvailablePositive4903161 - 490358616012.8
4-hydroxythreonine-4-phosphate dehydrogenaseEC845_4417Not AvailableNegative4903607 - 490461435103.2
tripartite-type tricarboxylate transporter receptor subunit tctcEC845_4418Not AvailableNegative4904631 - 490560534471.8

Displaying genes 4361 – 4370 of 4419 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.