Comamonas sp. BIGb0124

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas sp. BIGb0124 is a rod-shaped bacterium characterized by the presence of flagella, which are important for motility. This species has been identified with a single replicon, indicating a relatively simple genomic structure. The genetic information for Comamonas sp. BIGb0124 can be accessed through the accession number RJVF00000000.1, which serves as a reference for further study and analysis. Comamonas species are known for their versatility in various environments, often thriving in soil and water ecosystems. Their motility, facilitated by flagella, may enhance their ability to colonize diverse niches and utilize a range of substrates. This capability suggests that Comamonas sp. BIGb0124 might play a role in biogeochemical cycles, particularly in the degradation of organic compounds, which is a common trait among members of this genus. The presence of a single replicon may also indicate a streamlined genomic organization, potentially reflecting adaptations to specific ecological niches. Understanding the traits and ecological roles of Comamonas sp. BIGb0124 can provide insights into its contributions to microbial communities and ecosystem functioning, especially in contexts where organic matter degradation is essential for nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas sp. BIGb0124
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas sp. BIGb0124 Ga0304810_109, whole genome shotgun

Gene Summary

Adenine Count

850166 bp

Thymine Count

848769 bp

Guanine Count

1626199 bp

Cytosine Count

1633719 bp

Genome Length

4959933 bp

Protein-coding Genes

4304 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ornithine carbamoyltransferaseEC845_3131Not AvailablePositive3481631 - 348254533861.2
hypothetical proteinEC845_3132Not AvailablePositive3482686 - 348415252865.5
acs family glucarate transporter-like mfs transporter/acs family d-galactonate transporter-like mfs transporterEC845_3133Not AvailableNegative3484246 - 348560449415.1
gntr family transcriptional regulatorEC845_3134Not AvailablePositive3485767 - 348657029457.9
5-dehydro-4-deoxyglucarate dehydrataseEC845_3135Not AvailablePositive3486770 - 348768432722.1
nadp-dependent aldehyde dehydrogenaseEC845_3136Not AvailablePositive3487815 - 348939854786.9
beta-barrel assembly machine subunit bameEC845_3137Not AvailableNegative3489547 - 349008020070.7
uncharacterized protein duf3460EC845_3138Not AvailablePositive3490165 - 34903717936.29
condensin subunit scpaEC845_3139Not AvailablePositive3490430 - 349127532202.1
translation initiation factor 1 (bif-1)EC845_3140Not AvailablePositive3491669 - 34919209339.46

Displaying genes 3101 – 3110 of 4419 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.