Comamonas sp. BIGb0124

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas sp. BIGb0124 is a rod-shaped bacterium characterized by the presence of flagella, which are important for motility. This species has been identified with a single replicon, indicating a relatively simple genomic structure. The genetic information for Comamonas sp. BIGb0124 can be accessed through the accession number RJVF00000000.1, which serves as a reference for further study and analysis. Comamonas species are known for their versatility in various environments, often thriving in soil and water ecosystems. Their motility, facilitated by flagella, may enhance their ability to colonize diverse niches and utilize a range of substrates. This capability suggests that Comamonas sp. BIGb0124 might play a role in biogeochemical cycles, particularly in the degradation of organic compounds, which is a common trait among members of this genus. The presence of a single replicon may also indicate a streamlined genomic organization, potentially reflecting adaptations to specific ecological niches. Understanding the traits and ecological roles of Comamonas sp. BIGb0124 can provide insights into its contributions to microbial communities and ecosystem functioning, especially in contexts where organic matter degradation is essential for nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas sp. BIGb0124
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas sp. BIGb0124 Ga0304810_109, whole genome shotgun

Gene Summary

Adenine Count

850166 bp

Thymine Count

848769 bp

Guanine Count

1626199 bp

Cytosine Count

1633719 bp

Genome Length

4959933 bp

Protein-coding Genes

4304 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tripartite-type tricarboxylate transporter receptor subunit tctcEC845_2991Not AvailableNegative3313591 - 331453833928.9
4-hydroxy-tetrahydrodipicolinate synthaseEC845_2992Not AvailableNegative3314571 - 331550334400.2
laci family transcriptional regulatorEC845_2993Not AvailablePositive3315666 - 331673938792.6
diguanylate cyclase (ggdef)-like proteinEC845_2994Not AvailableNegative3316869 - 331839855675.0
n-acetylglutamate synthaseEC845_2995Not AvailablePositive3319146 - 332049549293.4
putative secreted proteinEC845_2996Not AvailableNegative3320524 - 332129726989.1
two-component system phosphate regulon response regulator omprEC845_2997Not AvailablePositive3321582 - 332231627347.8
hypothetical proteinEC845_2998Not AvailablePositive3322441 - 332338534962.5
tripartite-type tricarboxylate transporter receptor subunit tctcEC845_2999Not AvailablePositive3323644 - 332464834913.0
glutamate carboxypeptidaseEC845_3000Not AvailableNegative3324721 - 332587540777.8

Displaying genes 2961 – 2970 of 4419 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.