Comamonas sp. BIGb0124

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas sp. BIGb0124 is a rod-shaped bacterium characterized by the presence of flagella, which are important for motility. This species has been identified with a single replicon, indicating a relatively simple genomic structure. The genetic information for Comamonas sp. BIGb0124 can be accessed through the accession number RJVF00000000.1, which serves as a reference for further study and analysis. Comamonas species are known for their versatility in various environments, often thriving in soil and water ecosystems. Their motility, facilitated by flagella, may enhance their ability to colonize diverse niches and utilize a range of substrates. This capability suggests that Comamonas sp. BIGb0124 might play a role in biogeochemical cycles, particularly in the degradation of organic compounds, which is a common trait among members of this genus. The presence of a single replicon may also indicate a streamlined genomic organization, potentially reflecting adaptations to specific ecological niches. Understanding the traits and ecological roles of Comamonas sp. BIGb0124 can provide insights into its contributions to microbial communities and ecosystem functioning, especially in contexts where organic matter degradation is essential for nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas sp. BIGb0124
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas sp. BIGb0124 Ga0304810_109, whole genome shotgun

Gene Summary

Adenine Count

850166 bp

Thymine Count

848769 bp

Guanine Count

1626199 bp

Cytosine Count

1633719 bp

Genome Length

4959933 bp

Protein-coding Genes

4304 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell wall-associated nlpc family hydrolaseEC845_2498Not AvailableNegative2752973 - 275379429198.2
nicotinamidase-related amidaseEC845_2499Not AvailablePositive2754074 - 275468221850.3
membrane-bound lytic murein transglycosylase bEC845_2500Not AvailableNegative2754707 - 275590643657.0
hypothetical proteinEC845_2501Not AvailablePositive2756043 - 275683428229.3
(1->4)-alpha-d-glucan synthase (udp-glucose)EC845_2502Not AvailablePositive2756905 - 275828751093.5
glycosyltransferase involved in cell wall biosynthesisEC845_2503Not AvailablePositive2758287 - 275941741343.0
glycosyl transferase family 2EC845_2504Not AvailableNegative2759427 - 276053040752.8
glycosyltransferase involved in cell wall biosynthesisEC845_2505Not AvailableNegative2760530 - 276168742539.6
acetoin utilization deacetylase acuc-like enzymeEC845_2506Not AvailablePositive2761859 - 276281534552.0
mechanosensitive ion channel-like proteinEC845_2507Not AvailablePositive2762982 - 276435849090.6

Displaying genes 2471 – 2480 of 4419 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.