Comamonas sp. BIGb0124

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas sp. BIGb0124 is a rod-shaped bacterium characterized by the presence of flagella, which are important for motility. This species has been identified with a single replicon, indicating a relatively simple genomic structure. The genetic information for Comamonas sp. BIGb0124 can be accessed through the accession number RJVF00000000.1, which serves as a reference for further study and analysis. Comamonas species are known for their versatility in various environments, often thriving in soil and water ecosystems. Their motility, facilitated by flagella, may enhance their ability to colonize diverse niches and utilize a range of substrates. This capability suggests that Comamonas sp. BIGb0124 might play a role in biogeochemical cycles, particularly in the degradation of organic compounds, which is a common trait among members of this genus. The presence of a single replicon may also indicate a streamlined genomic organization, potentially reflecting adaptations to specific ecological niches. Understanding the traits and ecological roles of Comamonas sp. BIGb0124 can provide insights into its contributions to microbial communities and ecosystem functioning, especially in contexts where organic matter degradation is essential for nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas sp. BIGb0124
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas sp. BIGb0124 Ga0304810_109, whole genome shotgun

Gene Summary

Adenine Count

850166 bp

Thymine Count

848769 bp

Guanine Count

1626199 bp

Cytosine Count

1633719 bp

Genome Length

4959933 bp

Protein-coding Genes

4304 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
periplasmic chaperone for outer membrane proteins skpEC845_2478Not AvailablePositive2728512 - 272902119078.5
udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferaseEC845_2479Not AvailablePositive2729025 - 273008637160.8
3-hydroxyacyl-[acyl-carrier-protein] dehydrataseEC845_2480Not AvailablePositive2730234 - 273068317081.7
acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferaseEC845_2481Not AvailablePositive2730688 - 273147628088.7
lipid-a-disaccharide synthaseEC845_2482Not AvailablePositive2731491 - 273264542287.4
rnase hiiEC845_2483Not AvailablePositive2732614 - 273331524816.0
trmh family rna methyltransferaseEC845_2484Not AvailablePositive2733312 - 273410627964.8
trna threonylcarbamoyl adenosine modification protein (sua5/ycio/yrdc/ywlc family)EC845_2485Not AvailableNegative2734144 - 273476722629.4
threonine/homoserine efflux transporter rhtaEC845_2486Not AvailableNegative2734918 - 273581132548.9
hypothetical proteinEC845_2487Not AvailableNegative2735808 - 273671932694.5

Displaying genes 2451 – 2460 of 4419 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.