Marinimicrobium koreense strain DSM 16974

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Cellvibrionaceae

Genus

Marinimicrobium

Description

Marinimicrobium koreense strain DSM 16974 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is classified as mesophilic, with an optimal growth temperature of 37°C, indicating its preference for moderate temperature conditions. In terms of genetic structure, Marinimicrobium koreense has a single replicon, which may suggest a relatively streamlined genomic organization. Notably, this strain does not form spores, which is an important aspect of its biology, as it may impact its survival strategies under environmental stressors. The unique traits of Marinimicrobium koreense suggest its potential role in specific ecological niches, particularly in marine environments, given its genus association. The aerobic nature of this bacterium implies its involvement in processes that require oxygen, which could influence nutrient cycling and organic matter degradation in its habitat. Understanding the physiological characteristics of strain DSM 16974 can provide insights into its ecological functions and interactions within marine ecosystems. Overall, the combination of its Gram-negative classification, aerobic metabolism, and mesophilic growth preferences positions Marinimicrobium koreense as an interesting subject for further study in microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilyCellvibrionaceae
GenusMarinimicrobium
SpeciesMarinimicrobium koreense
Strainstrain DSM 16974

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinimicrobium koreense strain DSM 16974 Ga0244674_16, whole

Gene Summary

Adenine Count

807786 bp

Thymine Count

778333 bp

Guanine Count

1104505 bp

Cytosine Count

1157827 bp

Genome Length

3848841 bp

Protein-coding Genes

3204 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphatidylserine decarboxylaseEDC38_1969Not AvailablePositive2239947 - 224079831351.5
hd-gyp domain-containing protein (c-di-gmp phosphodiesterase class ii)EDC38_1970Not AvailableNegative2240838 - 224220551253.2
uroporphyrinogen decarboxylaseEDC38_1971Not AvailableNegative2242534 - 224360139439.4
glutamate synthase (nadph/nadh) small chainEDC38_1972Not AvailableNegative2243706 - 224512452235.9
glutamate synthase (nadph/nadh) large chainEDC38_1973Not AvailableNegative2245223 - 2249677162663.0
hypothetical proteinEDC38_1974Not AvailablePositive2250180 - 225142144998.6
damx proteinEDC38_1975Not AvailableNegative2251436 - 225302558401.0
3-dehydroquinate synthaseEDC38_1976Not AvailableNegative2253052 - 225415840332.7
shikimate kinaseEDC38_1977Not AvailableNegative2254227 - 225473918853.7
type iv pilus assembly protein pilqEDC38_1978Not AvailableNegative2254743 - 225690878989.6

Displaying genes 1961 – 1970 of 3251 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.