Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Lonsdalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Lonsdalea |
| Species | Lonsdalea populi |
| Strain | strain L6_4B 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
821858 bp
Thymine Count
826786 bp
Guanine Count
1028989 bp
Cytosine Count
1014783 bp
Genome Length
3696027 bp
Protein-coding Genes
3128 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EC392_04260 | Not Available | Positive | 986051 - 986854 | 28229.4 |
| elongation factor p hydroxylase | EC392_04265 | Not Available | Positive | 986875 - 987417 | 20737.4 |
| yfcl family protein | EC392_04270 | Not Available | Positive | 987456 - 987737 | 10298.1 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | EC392_04275 | Not Available | Negative | 988045 - 990063 | 73902.5 |
| beta-ketoacyl-acp synthase i | EC392_04280 | Not Available | Positive | 990226 - 991446 | 42808.0 |
| flagella biosynthesis regulator flk | EC392_04285 | Not Available | Negative | 991539 - 992657 | 40208.7 |
| 4-phosphoerythronate dehydrogenase pdxb | EC392_04290 | Not Available | Positive | 992906 - 994042 | 41300.4 |
| aspartate-semialdehyde dehydrogenase | EC392_04295 | Not Available | Positive | 994130 - 995140 | 36158.9 |
| trna pseudouridine(38-40) synthase trua | EC392_04300 | Not Available | Positive | 995143 - 995967 | 30672.8 |
| deda family protein | EC392_04305 | Not Available | Positive | 996014 - 996676 | 24878.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
